Match two partitions using Hungarian algorithm

Match sets from a partitions to a reference partition using the Hungarian algorithm to optimize F1 scores.

Usage

matchSets(pred, true, forceMatch = TRUE, returnIndices = is.integer(true))

Arguments

pred

An integer or factor of cluster labels

true

An integer or factor of reference labels

forceMatch

Logical; whether to enforce a match for every set of pred

returnIndices

Logical; whether to return indices rather than levels

Value

A vector of matching sets (i.e. level) from true for every set (i.e. level) of pred.